Journal Articles

• Yangyang Wang, Christian Guerrero-Juarez, Yuchi Qiu, Huijing Du, Weitao Chen, Seth Figueroa, Maksim Plikus, Qing Nie (2019) A multiscale hybrid mathematical model of epidermal-dermal interactions during skin wound healing. Experimental Dermatology, 28(4), 493-502.
• Yutong Sha, Daniel Haensel, Guadalupe Gutierrez, Huijing Du, Xing Dai, Qing Nie (2019) Intermediate cell states in epithelial-to-mesenchymal transition. Physical Biology, 16, 021001.
• Huijing Du, Yangyang Wang, Daniel Haensel, Briana Lee, Xing Dai, Qing Nie (2018) Multiscale Modeling of Layer Formation in Epidermis. PLoS Computational Biology, 14(2), e1006006. Featured on journal homepage.
• Lina Meinecke, Praveer Sharma, Huijing Du, Lei Zhang, Qing Nie and Thomas Schilling (2018) Modeling Craniofacial Development Reveals Spatiotemporal Constraints on Robust Patterning of the Mandibular Arch. PLoS Computational Biology, 14(11), e1006569.
• William R. Holmes, Nabora Soledad Reyes de Mochel, Qixuan Wang, Huijing Du, Tao Peng, Michael Chi ang, Olivier Cinquin, Ken Cho and Qing Nie (2017) Gene Expression Noise Enhances Robust Organization of the Early Mammalian Blastocyst. PLoS Computational Biology, 13(1), e1005320.
• Zhiliang Xu, Dinshaw S. Balsara and Huijing Du (2016) Divergence-Free WENO Reconstruction-Based Finite Volume Scheme for Solving Ideal MHD Equations on Triangular Meshes. Communications in Computational Physics, 19(4), 841-880.
• Huijing Du, Qing Nie and William R. Holmes (2015) The Interplay between Wnt Mediated Expansion and Negative Regulation of Growth Promotes Robust Intestinal Crypt Structure and Homeostasis. PLoS Computational Biology, 11(8), e1004285.
• Dinshaw S. Balsara, Chad Meyer, Michael Dumbser, Huijing Du and Zhiliang Xu (2013) Efficient Implementation of ADER Schemes for Euler and Magnetohydrodynamical Flows on Structured Meshes - Speed Comparisons with Runge-Kutta Methods. Journal of Computational Physics, 235, 934-969.
• Huijing Du, Zhiliang Xu, Morgen Anyan, Oleg Kim, W. Matthew Leevy, Joshua D. Shrout and Mark Alber (2012) High Density Waves of the Bacterium Pseudomonas aeruginosa in Propagating Swarms Result in Efficient Colonization of Surfaces. Biophysical Journal, 103(3), 601-609.
• Cameron Harvey, Huijing Du, Zhiliang Xu, Dale Kaiser, Mark Alber and Igor Aranson (2012) Intercon nected Cavernous Structure of Bacterial Fruiting Bodies. PLoS Computational Biology, 8(12), e1002850.
• Huijing Du, Zhiliang Xu, Joshua Shrout and Mark Alber (2011) Multiscale Modeling of Pseudomonas aeruginosa Swarming. Mathematical Models and Methods in Applied Sciences, 21 Suppl., 939-954.
• Zhiliang Xu, Yingjie Liu, Huijing Du, Guang Lin and Chi-Wang Shu (2011) Point-wise Hierarchical Reconstruction for Discontinuous Galerkin and Finite Volume Methods for Solving Conservation Laws. Journal of Computational Physics, 230(17), 6843-6865.
• Xionghua Wu, Huijing Du and Weibin Kong (2008) Differential Quadrature Trefftz Method for Poisson- type Problems on Irregular Domains. Engineering Analysis with Boundary Elements, 32(5), 413-423.
• Huijing Du and Xionghua Wu (2005) Radial Basis Functions based Differential Quadrature Domain De- composition Method on Irregular Domains. Numerical Mathematics, A Journal of Chinese Universities, S1, 165-169.

Conference Proceedings

• Huijing Du, Zhiliang Xu, Morgen Anyan, Oleg Kim, W. Matthew Leevy, Joshua D. Shrout and Mark Alber (2012) Pseudomonas aeruginosa Cells Alter Environment to Efficiently Colonize Surfaces using Fluid Dynamics. Proceedings of the ASME 2012 Summer Bioengineering Conference (SBC 2012).